guangchuangyu.github.io 的前十大競爭對手

bioconductor.org

Or: how I learned to stop worrying and love the t-SNEs.

yulab-smu.top

Research group led by Prof. Guangchuang Yu in School of Basic Medical Sciences, Southern Medical University

satijalab.org

Identify clusters of cells by a shared nearest neighbor (SNN) modularity optimization based clustering algorithm. First calculate k-nearest neighbors and construct the SNN graph. Then optimize the modularity function to determine clusters. For a full description of the algorithms, see Waltman and van Eck (2013) The European Physical Journal B. Thanks to Nigel Delaney (evolvedmicrobe@github) for the rewrite of the Java modularity optimizer code in Rcpp!

bioinformatics.com.cn

0代码在线绘制200+款科研图，火山图，聚类图，热图，散点图，circos图，气泡图，疫情图，venn图，pca图，motif图，生存曲线，雷达图，box图，小提琴图，染色体图，弦图

rdrr.io

R/tosR.R defines the following functions: tosR

rpkgs.datanovia.com

Contains data organized by topics: categorical data, regression model, means comparisons, independent and repeated measures ANOVA, mixed ANOVA and ANCOVA. The package code is under GPL-2; the data sets are covered by the terms in the LICENSE.note file (the authors data sets under CC0 1.0, and the heartdisease data under CC BY 4.0, see the heartdisease' help page).

bioc.r-universe.dev

The igblastr package provides functions to conveniently install and use a local IgBLAST installation from within R. The package also includes a set of built-in IgBLAST-compatible germline databases from OGRDB, the AIRR Community’s Open Germline Receptor Database, for various organisms. It provides functions to create additional IgBLAST-compatible germline databases using reference sequences retrieved from IMGT/V-QUEST or local FASTA files supplied by the user. When possible, annotations for the V and J alleles in a new germline database are automatically generated and added to the database, so they can be used as replacements for the internal and auxiliary data provided by IgBLAST. IgBLAST is described at . IgBLAST web interface: . OGRDB: . IMGT/V-QUEST download site: .

code.bioconductor.org

Search source code across all Bioconductor packages

bio.tools

A registry of bioinformatics software resources including biological databases, analytical tools and data services