Top 10 bioconductor.org Competitors

rdrr.io

A comprehensive index of R packages and documentation from CRAN, Bioconductor, GitHub and R-Forge.

cran.r-project.org

An ODBC database interface.

biorxiv.org

biorxiv - the preprint server for biology, operated by cold spring harbor laboratory, a research and educational institution

github.com

Join the world's most widely adopted, AI-powered developer platform where millions of developers, businesses, and the largest open source community build software that advances humanity.

rnabio.org

Preamble Cloud computing allows users to quickly access an arbitrary amount of compute resources from a distance without the need to buy or maintain hardware themselves. There are many cloud computing services. This tutorial describes the use of the Amazon Web Services (AWS) elastic compute (EC2) resource. However, the fundamental concepts covered here will generally apply to other cloud computing services such as Google Cloud, Digital Ocean, Microsoft Azure, etc., though with substantial differences in jargon used by each provider. Table of Contents Acknowledgements Glossary and abbreviations What do I need to perform this tutorial Creating an account Logging into the AWS console What is a Region? How much does it cost to use AWS EC2 resources? How does billing work? Necessary steps for launching an instance Step 1. Choosing an AMI Step 2. Choosing an instance type Step 3. Configuring instance details Step 4. Adding storage Storage volume options Step 5. Tagging the instance Step 6. Configuring a security group Step 7. Reviewing the instance before launch Step 8. Assigning a key pair Step 9. Reviewing launch status Step 10. Examining a new instance in the ec2 console Step 11. Logging into an instance Trouble-shooting and advanced topics Can not login to EC2 instance - what might have gone wrong? How do storage volumes appear within a linux instance on amazon EC2? Taking stock of compute resources within an ubuntu linux instance Basic setup and administration of an ubuntu linux instance Setting up an Apache web server What is difference between the start, stop, reboot and terminate instance states? How do I create my own AMI, publish as a Community AMI, and what is a snapshot? Tidying up and shutting down AWS resources Further reading and preparing for more advanced AWS cloud computing concepts Acknowledgements Creation of this tutorial on Amazon AWS EC2 was generously supported by Amazon AWS Education grants. Glossary and abbreviations AWS - Amazon Web Services. A

ncbi.nlm.nih.gov

Download a genome data package including genome, transcript and protein sequence, annotation and a data report

genome.ucsc.edu

ucsc genome browser

satijalab.org

Pan-Human Azimuth The Azimuth project represents a series of computational tools for reference-mapping of single cell data. As a powerful complement to manual annotation and exploration workflows,reference-mapping pipelines aim to utilize existing knowledge to help automate the annotation and interpretation of new datasets. We are excited to introduce our initial release of Pan-Human Azimuth, a neural network classifier that aims to annotate human single cell/nuclus RNA-sequencing experiments - across tissues and technologies - into a consistent and hierarchical cell ontology.